Computing Research Institute

HPC Community Publications

Rudi Eigenmann

Zhelong Pan and Rudolf Eigenmann, Fast Automatic Procedure-Level Performance Tuning, Proc. Parallel Architectures and Compilation Techniques (PACT'06), 2006.

Troy Johnson and Rudolf Eigenman, Context-Sensitive Domain-Independent Algorithm Composition and Selection, Proceedings of the ACM SIGPLAN Conference on Programming Language Design and Implementation,, (10 pages,) 2006.

Zhelong Pan and Rudolf Eigenmann, Fast and Effective Orchestration of Compiler Optimizations for Automatic Performance Tuning,The 4th Annual International Symposium on Code Generation and Optimization (CGO),, (12 pages,) March, 2006.

Ayon Basumallik and Rudolf Eigenmann, Optimizing Irregular Shared-Memory Applications for Distributed-Memory Systems,Proc. of the ACM Symposium on Principles and Practice of Parallel Programming (PPOPP'06),, ACM Press, (10 pages,) 2006.

Zhelong Pan, Xiaojuan Ren, Rudolf Eigenmann and Dongyan Xu, Executing MPI Programs on Virtual Machines in an Internet Sharing System,IEEE International Parallel & Distributed Processing Symposium (IPDPS), (10 pages,) April 2006.

Matthijs van Waveren, Kumaran Kalyanasundaram, Greg Gaertner, Wesley Jones, Rudolf Eigenmann, Ron Lieberman, Matthias S. Mueller, Brian Whitney and Hideki Saito, SPEC HPG Benchmarks for HPC Systems,Proc. Benchmarking Workshop 2006, (on CDROM) 2006.

Brian Armstrong, Hansang Bae, Rudolf Eigenmann, Faisal Saied, Mohamed Sayeed and Yili Zheng, HPC Benchmarking and Performance Evaluation With Realistic Applications, Proceedings of Benchmarking Workshop 2006, Austin, Texas, January 2006.

Hansang Bae and Rudolf Eigenmann, Interprocedural Symbolic Range Propagation for Optimizing Compilers,Proc. of the Workshop on Languages and Compilers for Parallel Computing(LCPC'05), (13 pages,) October, 2005.

Zhelong Pan, Brian Armstrong, Hansang Bae and Rudolf Eigenmann, On the Interaction of Tiling and Automatic Parallelization,First International Workshop on OpenMP (Wompat), (12 pages), June, 2005.

Xiaojuan Ren and Rudolf Eigenmann, iShare - Open Internet Sharing Built on Peer-to-Peer and Web,European Grid Conference,, pages 1117--1127, February, 2005.

Ayon Basumallik and Rudolf Eigenmann, Towards Automatic Translation of OpenMP to MPI,Proc. of the International Conference on Supercomputing, ICS'05,, pages 189--198, 2005.

Jong-Kook Kim, Howard Jay Siegel, Anthony A. Maciejewski and Rudolf Eigenmann, Dynamic mapping in Energy Constrained Heterogeneous Computing Systems,Proc. of International Parallel and Distributed Processing Symposium (IPDPS 2005),, April, 2005.

Faisal Saied

Gerhard Klimeck, Shaikh Ahmed, Hansang Bae, Neerav Kharche, Steve Clark, Benjamin Haley, Sunhee Lee, Maxim Naumov, Hoon Ryu, Faisal Saied, Marta Prada, Marek Korkusinski, and Timothy B. Boykin, "Atomistic Simulation of Realistically Sized Nanodevices Using NEMO 3-D: Part I - Models and Benchmarks", Invited paper in the Special Issue on Nanoelectronic Device Modeling in I EEE Transactions on Electron Devices, Vol. 54, No. 9, pp.2079--2089, 2007.

Lin Sun, Chinh Le, Faisal Saied, and Jayathi Y. Murthy, "Performance of a Parallel Molecular Dynamics Program for Computation of Thermal Properties", Numerical Heat Transfer, Part B: Fundamentals, Volume 51, Issue 3 & 4, pp. 315--331, April 2007.

James S. Hammonds, Faisal Saied, Mark A. Shannon, "Solving coupled 3-D paraxial wave and thermal diffusion equations with mixed-mode parallel computations". Parallel Computing 33(1), pp. 43-53, 2007.

SC’07 poster session (nominated for Best SC’07 Poster Award)

“A Massively Parallel Simulator for Nano-Electronics”, Hansang Bae, Steve Clark, Ben Haley, Gerhard Klimeck, Sunhee Lee, Maxim Naumov , Faisal Saied.

NEMO3D paper at Teragrid Conference 2007. (Presented by Gerhard Klimeck.)

Poster on NEMO3D presented at IWCE conference – Sept 06.


CSE paper “HPC Benchmarking and Performance Analysis with Real Applications” with Rudi Eigenmann, M Sayeed, Hansang Bae, and others.

In preparation:

Paper on Preconditioners for Saddle Point Problems. With Ahmed Sameh, Murat Manguoglu, Rice collaborators

Presentation accepted:

“A Massively Parallel Schrödinger Solver for Nano-Electronics” to be presented at the SIAM Conference on Parallel Processing for Scientific Computing, March 12-14 2008. With Hansang Bae, Steve Clark, Ben Haley, Gerhard Klimeck, Sunhee Lee, and Maxim Naumov .

Mohamed Sayeed

A paper related to SPEC project titled "HPC Benchmarking and Performance Analysis with Real Applications" has been submitted toIEEE Computing in Science and Engineering magazine is under second review.

A paper from Numerical Nuclear Reactor project titled "IMPROVED PARALLELIZATION OF THE MODULAR RAY TRACING IN THEMETHOD OF CHARACTERISTICS CODE DECART" has been presented at the M&C and SNA 2007 conference (Mathematics andComputation and Supercomputing in Nuclear Applications).

An invited paper titled "Grid Enabled Solution of Groundwater Inverse Problems on the TeraGrid Network" has been published in special issue on High Performance Computing of "Simulation: Transactions of the SCS" journal.

A draft of the paper titled “Computational Approaches to Evaluating BMP Scenarios Considering Stochasticity of Weather” based on the condor simulations is ready for submission.

Work is in progress on writing a paper related to SPEC MPI 2007 performance analysis and benchmarking activity.

Computing Research Institute

The mission of the Computing Research Institute (CRI) is to facilitate multidisciplinary research in high-performance computing (HPC) at Purdue. As of January 2007, CRI has joined the Cyber Center, representing the Center's high-end computing branch.


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